[INFO] fetching crate ncbi-vdb-sys 0.1.7...
[INFO] testing ncbi-vdb-sys-0.1.7 against try#0abe69e6c16114311cc2700e972492e64d69c28f for pr-154065-1
[INFO] extracting crate ncbi-vdb-sys 0.1.7 into /workspace/builds/worker-6-tc2/source
[INFO] removed /workspace/builds/worker-6-tc2/source/.cargo/config.toml
[INFO] started tweaking crates.io crate ncbi-vdb-sys 0.1.7
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate ncbi-vdb-sys 0.1.7
[INFO] tweaked toml for crates.io crate ncbi-vdb-sys 0.1.7 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate ncbi-vdb-sys 0.1.7 on toolchain 0abe69e6c16114311cc2700e972492e64d69c28f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate ncbi-vdb-sys 0.1.7 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 96334aa8ad7950855b9a5e717b4714b8f1e31b39791c8893de46ebebfa4eaa05
[INFO] running `Command { std: "docker" "start" "-a" "96334aa8ad7950855b9a5e717b4714b8f1e31b39791c8893de46ebebfa4eaa05", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "96334aa8ad7950855b9a5e717b4714b8f1e31b39791c8893de46ebebfa4eaa05", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "96334aa8ad7950855b9a5e717b4714b8f1e31b39791c8893de46ebebfa4eaa05", kill_on_drop: false }`
[INFO] [stdout] 96334aa8ad7950855b9a5e717b4714b8f1e31b39791c8893de46ebebfa4eaa05
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+0abe69e6c16114311cc2700e972492e64d69c28f" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b681985141ee0880cb8a96c734a61ec2de2240511d935baba80703649db4828d
[INFO] running `Command { std: "docker" "start" "-a" "b681985141ee0880cb8a96c734a61ec2de2240511d935baba80703649db4828d", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.180
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling syn v2.0.114
[INFO] [stderr]    Compiling num_cpus v1.17.0
[INFO] [stderr]    Compiling ncbi-vdb-sys v0.1.7 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr] error: failed to run custom build command for `ncbi-vdb-sys v0.1.7 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/ncbi-vdb-sys-28792f69aacba37e/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:rerun-if-changed=build.rs
[INFO] [stderr]   cargo:rerun-if-changed=vendor/ncbi-vdb/libs
[INFO] [stderr]   cargo:rerun-if-changed=vendor/ncbi-vdb/interfaces
[INFO] [stderr]   cargo:rerun-if-changed=vendor/ncbi-vdb/setup/konfigure.perl
[INFO] [stderr]   cargo:rerun-if-changed=vendor/ncbi-vdb/Makefile.env
[INFO] [stderr]   Configuring NCBI-VDB package
[INFO] [stderr]   checking system type... Linux
[INFO] [stderr]   checking OS distributor... 
[INFO] [stderr]   checking machine architecture... x86_64
[INFO] [stderr]   checking for supported architecture... x86_64 (64 bits) is supported
[INFO] [stderr]   checking for supported OS... Linux (linux) is supported
[INFO] [stderr]   checking for supported tool chain... gcc tool chain is supported
[INFO] [stderr]   checking for gcc... gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
[INFO] [stderr]   checking for g++... yes
[INFO] [stderr]   checking for Python 3... /usr/bin/python3
[INFO] [stderr]   checking whether g++ accepts -static-libstdc++... no
[INFO] [stderr]   checking for cmake... yes
[INFO] [stderr]   checking for fuse library... no
[INFO] [stderr]   checking for hdf5 library... no
[INFO] [stderr]   checking for magic library... no
[INFO] [stderr]   checking for xml2 library... no
[INFO] [stderr] 
[INFO] [stderr]   configure: creating 'build/ld.linux.exe_cmd.sh'
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   cannot open build/ld.linux.exe_cmd.sh to write at konfigure.perl line 885.
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (89) panicked at build.rs:37:13:
[INFO] [stderr]   Configure failed
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x647bb11ebd3a - std[ec4e911328de40a6]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x647bb11ebd3a - std[ec4e911328de40a6]::backtrace_rs::backtrace::trace_unsynchronized::<std[ec4e911328de40a6]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x647bb11ebd3a - std[ec4e911328de40a6]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x647bb11ebd3a - <<std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[a96a4c5c53f902a3]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x647bb11fd39a - <core[a96a4c5c53f902a3]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x647bb11fd39a - core[a96a4c5c53f902a3]::fmt::write
[INFO] [stderr]      6:     0x647bb11f00c2 - std[ec4e911328de40a6]::io::default_write_fmt::<std[ec4e911328de40a6]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x647bb11f00c2 - <std[ec4e911328de40a6]::sys::stdio::unix::Stderr as std[ec4e911328de40a6]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/io/mod.rs:1994:13
[INFO] [stderr]      8:     0x647bb11d135f - <std[ec4e911328de40a6]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x647bb11d135f - std[ec4e911328de40a6]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x647bb11e7951 - std[ec4e911328de40a6]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x647bb11e7b0b - std[ec4e911328de40a6]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:825:13
[INFO] [stderr]     12:     0x647bb11d144a - std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:691:13
[INFO] [stderr]     13:     0x647bb11c8fd9 - std[ec4e911328de40a6]::sys::backtrace::__rust_end_short_backtrace::<std[ec4e911328de40a6]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x647bb11d1c7d - __rustc[aa69f48705c57ca8]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:689:5
[INFO] [stderr]     15:     0x647bb11fdacc - core[a96a4c5c53f902a3]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x647bb11a16b3 - build_script_build[4efacb62072a0056]::main
[INFO] [stderr]     17:     0x647bb11a32f3 - <fn() as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     18:     0x647bb11a0a16 - std[ec4e911328de40a6]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     19:     0x647bb11a0e59 - std[ec4e911328de40a6]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     20:     0x647bb11e6b94 - <&dyn core[a96a4c5c53f902a3]::ops::function::Fn<(), Output = i32> + core[a96a4c5c53f902a3]::panic::unwind_safe::RefUnwindSafe + core[a96a4c5c53f902a3]::marker::Sync as core[a96a4c5c53f902a3]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     21:     0x647bb11e6b94 - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<&dyn core[a96a4c5c53f902a3]::ops::function::Fn<(), Output = i32> + core[a96a4c5c53f902a3]::panic::unwind_safe::RefUnwindSafe + core[a96a4c5c53f902a3]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stderr]     22:     0x647bb11e6b94 - std[ec4e911328de40a6]::panicking::catch_unwind::<i32, &dyn core[a96a4c5c53f902a3]::ops::function::Fn<(), Output = i32> + core[a96a4c5c53f902a3]::panic::unwind_safe::RefUnwindSafe + core[a96a4c5c53f902a3]::marker::Sync>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stderr]     23:     0x647bb11e6b94 - std[ec4e911328de40a6]::panic::catch_unwind::<&dyn core[a96a4c5c53f902a3]::ops::function::Fn<(), Output = i32> + core[a96a4c5c53f902a3]::panic::unwind_safe::RefUnwindSafe + core[a96a4c5c53f902a3]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stderr]     24:     0x647bb11e6b94 - std[ec4e911328de40a6]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/rt.rs:175:24
[INFO] [stderr]     25:     0x647bb11e6b94 - std[ec4e911328de40a6]::panicking::catch_unwind::do_call::<std[ec4e911328de40a6]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:581:40
[INFO] [stderr]     26:     0x647bb11e6b94 - std[ec4e911328de40a6]::panicking::catch_unwind::<isize, std[ec4e911328de40a6]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panicking.rs:544:19
[INFO] [stderr]     27:     0x647bb11e6b94 - std[ec4e911328de40a6]::panic::catch_unwind::<std[ec4e911328de40a6]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/panic.rs:359:14
[INFO] [stderr]     28:     0x647bb11e6b94 - std[ec4e911328de40a6]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/0abe69e6c16114311cc2700e972492e64d69c28f/library/std/src/rt.rs:171:5
[INFO] [stderr]     29:     0x647bb11a0991 - std[ec4e911328de40a6]::rt::lang_start::<()>
[INFO] [stderr]     30:     0x647bb11a3385 - main
[INFO] [stderr]     31:     0x76a21311f1ca - <unknown>
[INFO] [stderr]     32:     0x76a21311f28b - __libc_start_main
[INFO] [stderr]     33:     0x647bb119f5f5 - _start
[INFO] [stderr]     34:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "b681985141ee0880cb8a96c734a61ec2de2240511d935baba80703649db4828d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b681985141ee0880cb8a96c734a61ec2de2240511d935baba80703649db4828d", kill_on_drop: false }`
[INFO] [stdout] b681985141ee0880cb8a96c734a61ec2de2240511d935baba80703649db4828d
